????????????????Division of Med??ical Microbio??logy?

Publications??


2024

Journal articles?

1.    DRAMOWSKI A, BOLTON L, BEKKER A, ET AL. Epidemiology of healthcare-associated bloodstream infection in South African neonatal units. BMC Infect Dis. 2024;24:1350. https://doi.org/10.1186/s12879-024-10219-0

 

2.    DRAMOWSKI A, ERASMUS L, FATAAR A, COTTON MF, WHITELAW AC, COFFIN S, BEKKER A. Impact of a care bundle on short peripheral catheter-associated complications in a resource-limited neonatal unit. J Vasc Access. 2024 Sep 19:11297298241278394. https://doi.org/10.1177/11297298241278394

 

3.    DRAMOWSKI A, PRUSAKOV P, GOFF DA, BRINK A, GOVENDER NP, ANNOR AS, ET AL. Prospective antimicrobial stewardship interventions by multidisciplinary teams to reduce neonatal antibiotic use in South Africa: The Neonatal Antimicrobial Stewardship (NeoAMS) study. Int J Infect Dis. 2024;146:107158. https://doi.org/10.1016/j.ijid.2024.107158

 

4.    FATAAR A, PILLAY-FUENTES LORENTE V, DECLOEDT EH, VAN ECK A, REDDY K, DRAMOWSKI A, ET AL. A Retrospective Study Evaluating Neonatal Vancomycin Loading Doses to Achieve a Therapeutic Target. Ther Drug Monit. 2024 Dec;46(6):735-43. https://doi.org/10.1097/FTD.0000000000001234

 

5.    GLANZMANN B, SCHOLTZ D, VAN COLLER A, ABRAHAM DR, DU TOIT M, NORTJE R, ET AL. Inborn errors of immunity in South Africa: genetics and the expanding universe. Curr Allergy Clin Immunol. 2024 Mar;37(1). https://doi.org/10520/ejc-caci-v37-n1-a2

 

6.    HODKINSON KE, WILLEM P, MOODLEY M, ENGELBRECHT D, PATEL P, WIGGILL T, ET AL. The genetic landscape of acute myeloid leukaemia in the South African public sector. S Afr J Oncol. 2024;8:a309. https://doi.org/10.4102/sajo.v8i0.309

 

7.    HUNTER LD, POERSTAMPER S, HERBST PG, DOUBELL AF, PIENAAR C, PROZESKY H, ET AL. Bartonella endocarditis: lessons learnt from an African cohort. Eur Heart J. 2024 Oct;45(Suppl 1):ehac666.1960. https://doi.org/10.1093/eurheartj/ehac666.1960

 

8.    HURWITZ JS, NEWTON-FOOT M, NEL VAN ZYL K, NEL P. Fosfomycin susceptibility testing and resistance mechanisms in Enterobacterales in South Africa. Afr J Lab Med. 2024;13(1):a2252. https://doi.org/10.4102/ajlm.v13i1.2252

 

9.    KAKARASKOSKA BOCESKA B, VILKEN T, XAVIER BB, ET AL. Assessment of three antibiotic combination regimens against Gram-negative bacteria causing neonatal sepsis in low- and middle-income countries. Nat Commun. 2024;15:3947. https://doi.org/10.1038/s41467-024-48296-z

 

10.  LLOYD LG, DRAMOWSKI A, BEKKER A, BALLOT DE, FERREYRA C, GLEESON B, ET AL. Multicentre external validation of the Neonatal Healthcare-associated infectiOn Prediction (NeoHoP) score: a retrospective case–control study. BMJ Paediatr Open. 2024;8:e002748. https://doi.org/10.1136/bmjpo-2024-002748

 

11.  LOVELOCK T, DU PLESSIS M, VAN DER WESTHUIZEN C, JANSON JT, LAWRENCE C, PARKER A, ET AL. Non-toxigenic Corynebacterium diphtheriae endocarditis: A cluster of five cases. S Afr J Infect Dis. 2024;39(1):a539. https://doi.org/10.4102/sajid.v39i1.539

 

12.  MARAIS G, MOODLEY C, CLAASSEN-WEITZ S, PATEL F, PRENTICE E, TOOTLA H, ET AL.; Cape Town Antimicrobial Stewardship Study Alliance. Carbapenem-resistant Klebsiella pneumoniae among hospitalized patients in Cape Town, South Africa: molecular epidemiology and characterization. JAC Antimicrob Resist. 2024 Mar 25;6(2):dlae050. https://doi.org/10.1093/jacamr/dlae050

 

13.  MOLELEKI M, NEL P, MATUKANE SR, CLOETE S, ABRAHAMS Z, WOLTER N, WHITELAW AC. Enhanced pathogen identification among patients with clinically suspected meningitis. S Afr J Infect Dis. 2024;39(1):a688. https://doi.org/10.4102/sajid.v39i1.688

 

14.  MOLOTO K, NEWTON-FOOT M, WHITELAW A, DRAMOWSKI A. Emergence and expansion of carbapenem resistant enterobacterales in the Western Cape Province, South Africa. PLoS One. 2024;19(8):e0309315. https://doi.org/10.1371/journal.pone.0309315

 

15.  MWAPE K, MUBANGA C, CHILYABANYAMA ON, CHIBESA K, CHISENGA CC, SILWAMBA S, RANDALL A, LIANG X, BARNARD TG, SIMUYANDI M, CHILENGI R. Application of a Novel Proteomic Microarray Reveals High Exposure to Diarrhoeagenic Escherichia coli among Children in Zambia Participating in a Phase I Clinical Trial. Microorganisms. 2024 Feb 20;12(3):420. https://doi.org/10.3390/microorganisms12030420. PMID: 38543471; PMCID: PMC10972023.

 

16.  NANA T, RAMJATHAN P, HAN KS, REDDY K. Clostridioides difficile infection and testing rates in South Africa: A multicentre study, 2017–2020. Anaerobe. 2025;91:102937. DOI: https://doi.org/10.1016/j.anaerobe.2024.102937

 

17.  NEL R, JANSON J, ESTERHUIZEN T, VAN DER WESTHUIZEN C. The Surgical Outcome of Infective Endocarditis in South Africa over 10 Years: A Retrospective Review. J Clin Med. 2024 Sep 3;13(17):5226. https://doi.org/10.3390/jcm13175226

 

18.  NIETO-ROSADO, M., SANDS, K., PORTAL, E.A.R. ET AL. Colonisation of hospital surfaces from low- and middle-income countries by extended spectrum β-lactamase- and carbapenemase-producing bacteria. Nat Commun 15, 2758 (2024). https://doi.org/10.1038/s41467-024-46684-z

 

19.  NYASINGA J, MUNSHI Z, KIGEN C, NYERERE A, MUSILA L, WHITELAW A, ET AL. Displacement of Hospital-Acquired, Methicillin-Resistant Staphylococcus aureus Clones by Heterogeneous Community Strains in Kenya over a 13-Year Period. Microorganisms. 2024;12(6):1171. https://doi.org/10.3390/microorganisms12061171

 

20.  OCLOO R, NEWTON-FOOT M, CHABUKA L, ZIEBUHR W, WHITELAW AC. Epidemiology and antibiotic resistance of staphylococci on commercial pig farms in Cape Town, South Africa. Sci Rep. 2024 Aug 26;14(1):19747. https://doi.org/10.1038/s41598-024-70183-2

 

21.  RUSSELL N, CLEMENTS MN, AZMERY KS, BEKKER A, BIELICKI J, DRAMOWSKI A. Safety and efficacy of whole-body chlorhexidine gluconate cleansing with or without emollient in hospitalised neonates (NeoCHG): a multicentre, randomised, open-label, factorial pilot trial. EClinicalMedicine. 2024 Mar;69:102463. https://doi.org/10.1016/j.eclinm.2024.102463

 

22.  TOOTLA HD, PRENTICE E, MOODLEY C, MARAIS G, NYAKUTIRA N, REDDY K, et al; Members (collaborators) of the Cape Town Antimicrobial Stewardship Study Alliance (CT-ASSA). Carbapenem-resistant Enterobacterales among hospitalized patients in Cape Town, South Africa: clinical and microbiological epidemiology. JAC-Antimicrob Resist. 2024 Apr;6(2):dlae051. https://doi.org/10.1093/jacamr/dlae051

 

23.  VAN DER WESTHUIZEN C, NEWTON-FOOT M, NEL P. Performance comparison of three commercial multiplex molecular panels for respiratory viruses at a South African academic hospital. Afr J Lab Med. 2024;13(1), a2415. https://doi.org/10.4102/ajlm.v13i1.2415

 

24.  VAUGHAN J, WIGGILL T, MIA Z, PATEL M. Tumour-associated macrophages in diffuse large B-cell lymphoma: the prognostic and therapeutic impact in a South African centre with high HIV seroprevalence. Immunol Res. 2024 Dec;72(6):1393-1403. https://doi.org/10.1007/s12026-024-09537-x

 

VON GOTTBERG A, KLEYNHANS J, DE GOUVEIA L, TEMPIA S, MEIRING S, QUAN V, ET AL. Long-term effect of pneumococcal conjugate vaccines on invasive pneumococcal disease incidence among people of all ages from national, active, laboratory-based surveillance in South Africa, 2005–19: a cohort observational study. Lancet Infect Dis. 2024 Sep;12(9):e1470-e1484. https://doi.org/10.1016/S2214-109X(24)00263-8?


2023

Journal articles

1.    ABRAHAMS I, DRAMOWSKI A, MOLOTO K, LLOYD LG, WHITELAW AC, BEKKER A. Colistin use in a carbapenem-resistant enterobacterales outbreak at a South African neonatal unit. S Afr J Infect Dis. 2023;38(1):a487. https://doi.org/10.4102/sajid.v38i1.487

 

2.    AIKEN AM, NYAMWAYA B, MADRID L, EDESSA D, LABI A-K, OBENG-NKRUMEH N, MWABAYA W, DRAMOWSKI A, ET Al. Circumstances for treatment and control of invasive enterobacterales infections in eight hospitals across sub-Saharan Africa: a cross-sectional study. Gates Open Res. 2023;7:21. https://doi.org/10.12688/gatesopenres.14267.1 

 

3.    AIKEN AM, REHMAN AM, DE KRAKER MEA, MADRID L, KEBEDE M, LABI A-K, OBENG-NKRUMEH N, DRAMOWSKI A, ET AL. Mortality associated with third-generation cephalosporin resistance in Enterobacterales bloodstream infections at eight sub-Saharan African hospitals (MBIRA): a prospective cohort study. Lancet Infect Dis. 2023;23:1280-90. https://doi.org/10.1016/s1473-3099(23)00233-5

 

4.    COOK A, FERRERAS-ANTOLIN L, ADHISIVAM B, BALLOT D, BERKLEY JA, BERNASCHI P, CARVALHEIRO CG, DRAMOWSKI A, WHITELAW AC, ET AL. Neonatal invasive candidiasis in low- and middle-income countries: Data from the NeoOBS study. Med Mycol. 2023;61:myad010. https://doi.org/10.1093/mmy/myad010

 

5.    DOMINGUEZ 3, BOEREE MJ, CAMBAU E, CHESOV D, CONRADIE F, COX HS, DHEDA K, DUDNYK A, WHITELAW AC. Clinical implications of molecular drug resistance testing for Mycobacterium tuberculosis: a 2023 TB net /RESIST-TB consensus statement. Lancet Infect Dis. 2023;23(4):e122-e37. https://doi.org/10.5588/ijtld.15.0221

 

6.    DRAMOWSKI A, OLIVIER LM, AUCAMP M, FATAAR A, COTTON MF, COFFIN S, BEKKER A, WHITELAW AC. SafeHANDS: A multimodal hand hygiene intervention in a resource-limited neonatal unit. Trop Med Infect Dis. 2023;8:27. https://doi.org/10.3390/tropicalmed8010027

 

7.    ENGEL ME, MOLOI HA, ABDULLAHI L, NKEPU S, MUHAMED B, BARTH D, WHITELAW AC. Prevalence of group A streptococcal carriage in school children from Cape Town: A cross-sectional study and systematic review. SAMJ S Afr Med J. 2023;113:1121-9. https://doi.org/10.7196/SAMJ.2023.v113i3b.16850

 

8.    MCKENZIE C, SCHAAF HS, CROUCAMP R, PALMER M, BOSCH C, GOUSSARD P, RABIE H, WHITELAW AC, HESSELING AC, VAN NIEKERK MS, VAN DER ZALM MM, WALTERS E. Recurrent Tuberculosis Treatment Episodes in Children Presenting With Presumptive Pulmonary Tuberculosis in Cape Town, South Africa. Pediatr Infect Dis J. 2023;42:543-8. https://doi.org/10.1097/inf.0000000000003922

 

9.    MOLOTO K, DUBE P, DRAMOWSKI A, WHITELAW AC, NEWTON-FOOT M. Epidemiology, risk factors, and clinical outcomes of carbapenem-resistant Enterobacterales in Africa: A systematic review. J Glob Antimicrob Resist. 2023;35:297-306. https://doi.org/10.1016/j.jgar.2023.10.008

 

10.  MUBANGA CP, SIMUYANDI M, MWAPE K, CHIBESA K, CHISENGA C, CHILYABANYAMA ON, RANDALL A, GLASHOFF RH. Use of an ETEC Proteome Microarray to Evaluate Cross-Reactivity of ETVAX. Vaccine-Induced IgG Antibodies in Zambian Children. Environments - MDPI. 2023;11:939. https://doi.org/10.3390/vaccines11050939

 

11.  MWAPE K, BOSOMPRAH S, CHIBESA K, SILWAMBA S, LUCHEN CL, SUKWA N, MUBANGA CP, PHIRI B. Prevalence of Diarrhoeagenic Escherichia coli among Children Aged between 0-36 Months in Peri-Urban Areas of Lusaka. Environments - MDPI. 2023;11:2790. https://doi.org/10.3390/microorganisms11112790

 

12.  NICHOLSON T, HODDINOTT G, SEDDON JA, CLAASSENS MM, VAN DER ZALM MM, LOPEZ VARELA EB, BOCK PA, CALDWELL J, DA COSTA D ET AL. A Systematic Review of Risk Factors for Mortality among Tuberculosis Patients in South Africa. Syst Rev. 2023;12:23. https://doi.org/10.1186/s13643-023-02175-8

 

13.  NYAWO GR, NAIDOO CC, WU BG, SULAIMAN I, CLEMENTE JC, LI Y, MINNIES S, REEVE BWP, MOODLEY S, RAUTENBACH C, WRIGHT CA, SINGH S, WHITELAW AC ET AL. More than Mycobacterium tuberculosis: site-of-disease microbial communities, and their functional and clinical profiles in tuberculous lymphadenitis. Thorax. 2023;78(3):297-308. https://doi.org/10.1136/thorax-2022-219103

 

14.  OCLOO R, NEWTON-FOOT M, ZIEBUHR W, WHITELAW AC. Molecular epidemiology and antibiotic resistance of staphylococci other than Staphylococcus aureus in children in Cape Town, South Africa. Front Microbiol. 2023;14:1239666. https://doi.org/10.3389/fmicb.2023.1239666

 

15.  REDDY K, RAMSAMY Y, SWE SWE-HAN K, NANA T, BLACK M, KOLOJANE M, CIBABHAI V. Antimicrobial resistance and antimicrobial stewardship in South Africa: a survey of healthcare workers in academic and nonacademic hospitals. Antimicrob Steward Healthc Epidemiol. 2023;4:83. https://doi.org/10.1017/ash.2023.483

 

16.  RUHANYA V, JACOBS GB, PAUL RH, JOSKA JA, SEEDAT S, NYANDORO G, GLASHOFF RH, ENGELBRECHT S. HIV-1 subtype C Vpr amino acid residue 45Y and specific conserved fragments are associated with neurocognitive impairment and markers of viral load. AIDS Res Hum Retroviruses. 2023;39(4):166-75. https://doi.org/10.1089/aid.2022.0022

 

17.  SEWANYWA L, HALE M, MICHELOW P, MAYNE E, WIGGILL T. Validation of the Xpert Breast Cancer STRAT 4 Assay on the GeneXpert instrument to Assess Hormone Receptor, Ki67, and HER2 Gene Expression Status in Breast Cancer Tissue Samples. Appl Immunohistochem Mol Morphol. 2023;31(9):613-20. https://doi.org/10.1097/pai.0000000000001149

 

18.  SMITH AM, ERASMUS LK, SMOUSE SL, NGOMANE HM, TAU NP, WHITELAW AC. Enteric fever cluster identification in South Africa using genomic surveillance of Salmonella enterica serovar Typhi. Microb Genom. 2023;9:001044. https://doi.org/10.1099/mgen.0.001044

 

19.  SOWDEN M, VAN NIEKERK E, BULABULA ANH, DRAMOWSKI A, WHITELAW AC, TWISK J, VAN WEISSENBRUCH MM. Impact of a multi-strain probiotic administration on peri-rectal colonization with drug resistant Gram-negative bacteria in preterm neonates. Front Pediatr. 2023;10:1002762. https://doi.org/10.3389/fped.2022.1002762?


2022

Journal articles

  1. ENGELBRECHT A, VAN RENSBUR?G R, DA COSTA D, CHOTHIA M. Aspergillus fumigatus: a rare cause of peritonitis in a peritoneal dialysis patient (a case report). Pan African Medical Journal 2022; 43(35):10.11604, 7 pages. https://doi.org/10.11604/pamj.2022.43.35.32583??

  2. DOWLING WB, WHITELAW AC, NEL P. Tracing TB: Are there predictors for active TB disease in patients with Xpert Ultra trace results?. International Journal of Infectious Diseases 2022; 114:115-123. https://doi.org/10.1016/j.ijid.2021.10.056??

  3. CORNELISSEN HM, MUSEKWA EM, GLASHOFF RH, ESSER MM, DZIKITI M, ABRAHAM DR, CHAPANDUKA ZC. Peripheral-blood cytopenia, an early indicator of inborn errors of immunity. British Journal of Haematology 2022; 198:875-886. https://doi.org/10.1111/bjh.18337?

  4. RUHANYA V, JACOBS GB, PAUL RH, JOSKA J, SEEDAT 5, NYANDORO G, GLASHOFF RH, ENGELBRECHT S. HIV-1 subtype C Tat exon-1 amino acid residue 24K is a signature for neurocognitive impairment. Journal of Neurovirology 2022; 28(3):392-403. https://doi.org/10.1007/s13365-022-01073-4?

  5. RUHANYA V, JACO?BS GB, PAUL RH, JOSKA JA, SEEDAT S, NYANDORO G, GLASHOFF RH, ENGELBRECHT S. HIV-1 subtype C Vpr amino acid residue 45Y and specific conserved fragments are associated with neurocognitive impairment and markers of viral load. AIDS Research and Human Retroviruses; ?http://doi.org/10.1089/AID.2022.0022. https://doi.org/10.1089/AID.2022.0022?

  6. NEL VAN ZYL K, MATUKANE SR, HAMMAN BL, WHITELAW AC, NEWTON-FOOT M. Effect of antibiotics on the human microbiome: a systematic review. International Journal of Antimicrobial Agents 2022; 59(2):1-32. https://doi.org/10.1016/j.ijantimicag.2021.106502

  7. MOSIME LB, NEWTON-FOOT M, NEL P. Fosfomycin resistan?ce in community-acquired urinary pathogens from Western Cape, SA. Southern African Journal of Infectious Diseases (Formerly Southern African Journal of Epidemiology and Infection) 2022; 37(1):1-4. https://doi.org/10.4102/sajid.v37i1.321? 

  8. ?GOUSSARD P, EBER E, MFINGWANA L, NEL P, SCHUBERT P, JANSON JT, PITCHER RD, NAUDE CE. Paediatric pulmonary echinococcosis: A neglected disease. Paediatric Respiratory Reviews 2022; 43 11-23. https://doi.org/10.1016/j.prrv.2021.11.001

  9. GOUSSARD P, EBER E, RABIE H, NEL P, SCHUBERT P. Paediatric pulmonary actinomycosis: A forgotten disease. Paediatric Respiratory Reviews 2022; 1(1):1. https://doi.org/10.1016/j.prrv.2021.09.001?

  10. SINGH S, NEWTON-FOOT M, NEL P, PIENAAR C. Comparison of commercial assays and two-step approach to detect Clostridioides difficile in SA. African Journal of Laboratory Medicine 2022; 11(1):1-6. https://doi.org/10.4102/ajlm.v11i1.1809?

  11. OCLOO R, NYASINGA J, MUNSHI Z, HAMDY A, MARCINIAK T, SOUNDARARAJAN M, NEWTON-FOOT M, ZIEBUHR W, SHITTU A, REVATHI G, ABOUELFETOUH A, WHITELAW AC. Epidemiology and antimicrobial resistance of staphylococci other than Staphylococcus aureus from domestic animals and livestock in Africa: a systematic review. Frontiers in Veterinary Science 2022; 10:1-17.  https://doi.org/10.3389/fvets.2022.1059054?

  12. VAN ZYL KN, WHITELAW AC, HESSELING AC, SEDDON JA, DEMERS A, NEWTON-FOOT M. Fungal diversity in the gut microbiome of young South African children. BMC MICROBIOLOGY 2022; 22:201.?? https://doi.org/10.1186/s12866-022-02615-w?

  13. PECORARO AJK, HERBST PG, JANSON JT, WAGENAAR R, ISMAIL Z, TALJAARD JJ, PROZESKY HW, PIENAAR C, DOUBELL AF. Early surgery determines prognosis in patients with infective endocarditis: outcome in patients managed by an Endocarditis Team - a prospective cohort study. Cardiovascular Diagnosis and Therapy 2022; 12(4):453-463. https://doi.org/10.21037/cdt-21-590?

  14. PECORARO AJK, HERBST PG, JOUBERT LH, HASSAN KM, PIENAAR C, TALJAARD JJ, PROZESKY HW, JANSON JT, DOUBELL AF. Echocardiographic features of infective endocarditis in South Africa: A prospective cohort study. SAM) South African Medical Journal 2022; 112(5):321-327. http://dx.doi.org/10.7196/SAMJ.2022.v112i5.15910??

  15. PECORARO AJK, HERBST PG, PIENAAR C, TALJAARD JJ, PROZESKY HW, JANSON JT, DOUBELL AF. Modified Duke/European Society of Cardiology 2015 clinical criteria for infective endocarditis: time for an update?. Open Heart 2022; 9:e001856, 7 pages.  http://dx.doi.org/10.1136/openhrt-2021-001856

  16. ??DRAMOWSKI A, AIKEN AM, REHMAN AM, SNYMAN Y, REUTER S, GRUNDMANN H, SCOTT JAG, DE KRAKER MEA, WHITELAW AC. Mortality associated with third-generation cephalosporin resistance in Enterobacteriaceae bloodstream infections at one South African hospital. Journal of Global Antimicrobial Resistance 2022; 29:176-184. https://doi.org/10.1016/j.jgar.2022.03.001?

  17. ?ENGELBRECHT A, VAN DER WESTHUIZEN C, TALJAARD JJ. Ra??tionalising empirical antibiotics for bloodstream infections: A retrospective study at a South African district-level hospital. SAM] South African Medical Journal 2022; 112(1):27-33.  http://dx.doi.org/10.7196/SAMJ.2022.v112i1.15959???

  18. CARVALHO M, SANDS K, THOMSON K, PORTAL E, MATHIAS J, MILTON R, GILLESPIE D, DYER C, AKPULU C, BOOSTROM I, HOGAN P, SAIF H, FERREIRA A, NIETO M, HENDER T, HOOD K, ANDREWS R, WATKINS J, HASSAN B, CHAN GJ, BEKELE D, SOLOMON S, METAFARIA G, BASU S, NAHA S, WHITELAW AC et al. Antibiotic resistance genes in the gut microbiota of mothers and linked neonates with or without sepsis from low-and middle-income countries. Nature Microbiology 2022; 7:1337-1347.?                         https://doi.org/10.1038/s41564-022-01184-y???

  19. HATHORN FK, DE KOCK IH,? WASSERMAN E. Decision support for clinical laboratory test requisition: the utility of ICD-10 coding. South African Journal of Industrial Engineering 2022; 33(1):16-24. https://doi.org/10.7166/33-1-2556?

  20. DRAMOWSKI A, AUCAMP M, BEALES E, BEKKER A, COTTON MF, FITZGERALD FC, LABI A-K, RUSSELL N, STRYSKO J, WHITELAW AC, COFFIN S. Healthcare-Associated infection prevention interventions for neonates in resource-limited settings. Frontiers in Pediatrics 2022; 10:Article 919403. https://doi.org/10.3389/fped.2022.919403?

  21. ?HUSSAIN M, WHITELAW AC, PARKER A. A five-year retrospective descriptive study on the clinical characteristics and outcomes of candidaemia at a tertiary hospital in South Africa. IJID Regions 2022; 3:79-83. https://doi.org/10.1016/j.ijregi.2022.03.003?

  22. MILTON R, GILLESPIE D, DYER C, TAIYARI K, CARVALHO MJ, THOMSON K, SANDS K, PORTAL E, HOOD K, FERREIRA A, HENDER T, KIRBY N, MATHIAS 3, NIETO M, WATKINS J, BEKELE D, ABAYNEH M, SOLOMON S, BASU S, NANDY RK, SAHA B, IREGBU K, UWAEZUOLE 5, ZAHRA R, SHIRAZI H, WHITELAW AC et al. Neonatal sepsis and mortality in low-income and middle-income countries from a facility-based birth cohort: an international multisite prospective observational study. Lancet Global Health 2022; 10:661-672.            https://doi.org/10.1016/S2214-109X(22)00043-2?

  23. NYAWO GR, NAIDOO CC, WU BG, SULAIMAN I, CLEMENTE JC, LI Y, MINNIES S, REEVE BWP, MOODLEY S, RAUTENBACH C, WRIGHT CA, SINGH S, WHITELAW AC, SCHUBERT P, WARREN RM, SEGEL L, THERON GDV. More than Mycobacterium tuberculosis: site-of-disease microbial communities, and their functional and clinical profiles in tuberculous lymphadenitis. BMJ Open 2022; 0:1-12. https://doi.org/10.1136/thorax-2022-219103?

  24. PAPAVARNAVAS N, BRINK A, DLAMINI S, WASSERMAN S, WHITELAW AC, NTUSI NAB, MENDELSON M. Practice update to optimise the performance and interpretation of blood cultures: 2022. SAMJ South African Medical Journal 2022; 112(6):397-402.    https://doi.org/10.7196/SAMJ.2022.v112i6.16537?

  25. SANDS K, CARVALHO MJ, SPILLER 0 B, PORTAL E, THOMSEN KR, WATKINS J, MATHIAS 3, DYER C, AKPULU C, ANDREWS R, FERREIRA A, HENDER T, MILTON R, NIETO M, ZAHRA R, SHIRAZI H, MUHAMMAD A, AKIF 5, JAN M H, IREGBU K, MODIBBO F, UWAEZUOKE 5, CHAN GJ, BEKELE D, WHITELAW AC et al. Characterisation of Staphylococci species from neonatal blood cultures in low- and middle-income countries. BMC Infectious Diseases 2022; 22:1-16. https://doi.org/10.1186/s12879-022-07541-w??

  26. SOWDEN M, VAN NIEKERK E, BULABULA ANH, DRAMOWSKI A, WHITELAW AC, TWISK J, VAN WEISSENBRUCH MM. Impact of a multi-strain probiotic administration on peri-rectal colonization with drug-resistant Gram-negative bacteria in preterm neonates. Frontiers in Pediatrics 2022; 10(1002762):10 pages.? https://doi.org/10.3389/fped.2022.1002762?


2021

Journal articles

  1. ALSEQELY M, NEWTON-FOOT M, KHALIL A, EL NAKEEB M, ABOUELFETOUH A, WHITELAW AC. Association between fluoroquinolone resistance and MRSA genotype in Alexandria, Egypt. Scientific Reports 2021; 11(4253):1-9. https://doi.org/10.1038/s41598-021-83578-2?

  2. AMENYOGBE N, DIMITRU P, SMOLEN KK, BROWN EM, SHANNON CP, TEBBUTT SJ, COOPER PJ, MARCHANT A, GOETGHEBUER T, ESSER MM, FINLAY BB, KOLLMANN TR, MOHN WW. Biogeography of the Relationship between the Child Gut Microbiome and the Innate Immune System. ASM Science Journal 2021; 12(1):1-18. https://dx.doi.org/10.1128%2FmBio.03079-20

  3. CORNELISSEN HM, GLANZMANN B, VAN COLLER A, ENGELBRECHT C, ABRAHAM DR, REDDY K, MOLLER M, KINNEAR CJ, GLASHOFF RH, ESSER MM. Mendelian susceptibility to mycobacterial disease in tuberculosis-hyperendemic South Africa. SAMJ South African Medical Journal 2021; 111(10):998-1005. http://dx.doi.org/10.7196%2FSAMJ.2021.v111i10.15341?

  4. DA COSTA D, NEL P. Re-decontamination of liquid mycobacterial cultures: Additional Mycobacterium tuberculosis yield in the era of Xpert MTB/RIF Ultra in Cape Town, South Africa. African Journal of Laboratory Medicine  2021; 10(1):1-3. https://doi.org/10.4102/ajlm.v10i1.1529?

  5. DOWLING WB, VAN DER WESTHUYZEN M, HAUMANN M, REDDY K. Non-toxigenic vibrio cholerae non-O1/non-O139 pseudobacteraemia in a neonate: A case report. Southern African Journal of Infectious Diseases (Formerly Southern African Journal of Epidemiology and Infection) 2021; 36(1):1-4.? https://doi.org/10.4102/sajid.v36i1.263? 

  6. DRAMOWSKI A, AUCAMP M, BEKKER A, PILLAY S, MOLOTO K, WHITELAW AC, COTTON MF, COFFIN S. NeoCLEAN: a multimodal strategy to enhance environmental cleaning in a resource-limited neonatal unit. Antimicrobial Resistance and Infection Control 2021; 10:35. https://doi.org/10.1186/s13756-021-00905-y?

  7. DRAMOWSKI A, BEKKER A, COTTON MF, WHITELAW AC, COFFIN S. Epidemiology of clinically suspected and laboratory-confirmed bloodstream infections at a South African neonatal unit. Journal of Infection in Developing Countries 2021; 15(7):943-952. https://doi.org/10.3855/jidc.13971?

  8. DRAMOWSKI A, ONG'AYO G, REHMAN AM, WHITELAW AC, LABI A-K, OBENG-NKRUMAH N, NDIR A, MAGWENZI MT, WOLKEWITZ M, DE KRAKER MEA, SCOTT JAG, ET AL AL. Mortality attributable to third-generation cephalosporin resistance in Gram-negative bloodstream infections in African hospitals: a multi-site retrospective study. JAC-Antimicrobial Resistance 2021; 3(1):dlaa130. http://dx.doi.org/10.1093/jacamr/dlaa130?

  9. DRAMOWSKI A, PILLAY S, BEKKER A, ABRAHAMS I, COTTON MF, COFFIN S, WHITELAW AC. Impact of 1% chlorhexidine gluconate bathing and emollient application on bacterial pathogen colonization dynamics in hospitalized preterm neonates – A pilot clinical trial. EClinicalMedicine 2021; 37:100946. https://doi.org/10.1016/j.eclinm.2021.100946?

  10. ENGELBRECHT C, URBAN MF, SCHOEMAN M, PAARWATER BA, VAN COLLER A, ABRAHAM DR, CORNELISSEN HM, GLASHOFF RH, ESSER MM, MOLLER M, KINNEAR CJ, GLANZMANN B. Clinical utility of whole exome sequencing and targeted panels for the identification of inborn errors of immunity in a resource-constrained setting. Frontiers in Immunology 2021; 12:1-12.  https://doi.org/10.3389/fimmu.2021.665621

  11. FERREIRA N, REDDY K, VENTER RG, LAUBSCHER M. Antibiogram profiles and efficacy of antibiotic regimens of bacterial isolates from chronic osteomyelitis of the appendicular skeleton: A developing-world perspective. SAMJ South African Medical Journal 2021; 111(7):642648. https://doi.org/10.7196/samj.2021.v111i7.15516?

  12. GLANZMANN B, JOOSTE TL, GHOOR S, GORDON R, MIA R, LI H, MAO J, CHARLS P, DOUMAN C, KOTZE MJ, PEETERS AV, LOOTS G, ESSER MM, TIEMESSEN CT, WILKINSON RJ, LOUW J, GRAY G, MOLLER M, WARREN RM, KINNEAR CJ. Human whole genome sequencingin South Africa . Scientific Reports 2021; 11:606, 8 pages. https://doi.org/10.1038/s41598-020-79794-x?

  13. GOUSSARD P, CROUCAMP R, BOSCH C, DEMERS A, MORRISON J, MFINGWANA L, PALMER M, VAN DER ZALM MM, FRIEDRICH SO, JANSON JT, WHITELAW AC, ANDRONIKOU S, HESSELING AC, WALTERS E, LOPEZ VARELA EB. Diagnostic utility of bronchoalveolar lavage in children with complicated intrathoracic tuberculosis. Pediatric Pulmonology 2021; 56(7):2186-2194. https://doi.org/10.1002/ppul.25405??

  14. GOUSSARD P, RABIE H, MARSHALL M, MFINGWANA L, MORRISON J, ISMAIL MZ, RETIEF FW, NEL P, DA COSTA D, ANDRONIKOU S, SCHUBERT P. Endobronchial actinomycosis in a child. Pediatric Pulmonology 2021; 56(10):3429-3432. https://doi.org/10.1002/ppul.25550

  15. KUMAR S, BOUIC PJD, ROSENKRANZ BF. Investigation of CYP2B6, 3A4 and β-esterase interactions of Withania somnifera (L.) dunal in human liver microsomes and HepG2 cells. Journal of Ethnopharmacology 2021; 24(270):113766, 16 pages. https://doi.org/10.1016/j.jep.2020.113766?

  16. MASHIGO N, ESSER MM. Game of Clones: A case of ELANE gene mutation-related neutropenia . Journal of Medical Laboratory Science and Technology ( Formelry Medical Technology SA) 2021; 3(1):8-10. http://dx.doi.org/10.36303/JMLSTSA.2021.3.1.65?

  17. MINNIES S, REEVE BWP, ROCKMAN LT, NYAWO GR, NAIDOO CC, KITCHIN N, RAUTENBACH C, WRIGHT CA, WHITELAW AC, SCHUBERT P, WARREN RM, THERON GDV. Xpert MTB/RIF Ultra is highly sensitive for the diagnosis of tuberculosis lymphadenitis in an HIV-endemic setting . Journal of Clinical Microbiology 2021; 59(12):e01316-21, 11 pages. https://doi.org/10.1128/jcm.01316-21?

  18. MOOLLA MS, REDDY K, FWEMBA I, NYASULU PRS, TALJAARD JJ, PARKER A, LOUW EH, NORTJE AJ, PARKER MA, LALLA U, KOEGELENBERG CFN, ALLWOOD BW. Bacterial infection, antibiotic use and COVID-19: Lessons from the intensive care unit. SAMJ South African Medical Journal 2021; 111(6):575-581. https://doi.org/10.7196/SAMJ.2021.v111i6.15590?

  19. MOOLLA MS, WHITELAW AC, DECLOEDT EH, KOEGELENBERG CFN, PARKER A. Opportunities to enhance antibiotic stewardship: colistin use and outcomes in a low-resource setting. JAC-Antimicrobial Resistance 2021; 3(4):doi.org/10.1093/jacamr/dlab169, 7 pages. https://dx.doi.org/10.1093%2Fjacamr%2Fdlab169?

  20. NEL VAN ZYL K, WHITELAW AC, HESSELING AC, SEDDON JA, DEMERS A, NEWTON-FOOT M. Association between clinical and environmental factors and the gut microbiota profiles in young South African children. Scientific Reports 2021; 11:15895. https://dx.doi.org/10.1038/s41598-021-95409-5?

  21. PECORARO AJK, HERBST PG, PIENAAR C, TALJAARD JJ, PROZESKY HW, JANSON JT, DOUBELL AF. Bartonella species as a cause of culture-negative endocarditis in South Africa. European Journal of Clinical Microbiology and Infectious Diseases 2021; 40:1873-1879. https://doi.org/10.1007/s10096-021-04239-w?

  22. PECORARO AJK, PIENAAR C, HERBST PG, POERSTAMPER S, JOUBERT LH, TALJAARD JJ, PROZESKY HW, JANSON JT, NEWTON-FOOT M, DOUBELL AF. Causes of infective endocarditis in the Western Cape, South Africa: a prospective cohort study using a set protocol for organism detection and central decision making by an endocarditis team. BMJ Case Reports 2021; 11:e053169, 8 pages. https://doi.org/10.1136/bmjopen-2021-053169?

  23. REDDY K, BEKKER A, WHITELAW AC, ESTERHUIZEN T, DRAMOWSKI A. A retrospective analysis of pathogen profile, antimicrobial resistance and mortality in neonatal hospital-acquired bloodstream infections from 2009-2018 at Tygerberg Hospital, South Africa. PLoS One 2021; 16(1):e0245089. https://doi.org/10.1371/journal.pone.0245089?

  24. REDDY K, GERICKE SH, RABIE H, PIENAAR C, MALOBA MRB. Exudative pharyngitis and Corynebacterium pseudodiphtheriticum: A case report and review of the literature. Southern African Journal of Infectious Diseases (Formerly Southern African Journal of Epidemiology and Infection) 2021; 36(1):a225. https://doi.org/10.4102/sajid.v36i1.225?

  25. REDDY K, WHITELAW AC. Can the Xpert MRSA/SA BC assay be used as an antimicrobial stewardship tool? A prospective assay validation and descriptive impact assessment study in a South African setting. BMC Infectious Diseases 2021; 21(177):1-9. https://doi.org/10.1186/s12879-021-05857-7?

  26. RUHANYA V, JACOBS GB, NAIDOO S, PAUL RH, JOSKA JA, SEEDAT S, NYANDORO G, ENGELBRECHT S, GLASHOFF RH. Impact of Plasma IP-10/CXCL10 and RANTES/CCL5 Levels on Neurocognitive Function in HIV Treatment-Na?ve Patients . AIDS Research and Human Retroviruses 2021; 37(9):657-665. https://doi.org/10.1089/aid.2020.0203?

  27. RUHANYA V, JACOBS GB, PAUL RH, JOSKA JA, SEEDAT S, NYANDORO G, ENGELBRECHT S, GLASHOFF RH. Plasma cytokine biomarker cutoff values for HIV-associated neurocognitive impairment in adults. VIRAL IMMUNOLOGY 2021; 34(10):1-8. https://doi.org/10.1089/vim.2021.0047?

  28. RUHANYA V, JACOBS GB, PAUL RH, JOSKA JA, SEEDAT S, NYANDORO G, ENGELBRECHT S, GLASHOFF RH. Plasma cytokine levels as predictors of global and domain-specific human immunodeficiency virus-associated neurocognitive impairment in treatment-naive individuals . JOURNAL OF INTERFERON AND CYTOKINE RESEARCH 2021; 41(4):153-160. https://doi.org/10.1089/jir.2020.0251?

  29. SANDS K, CARVALHO J, PORTAL E, THOMSON K, DYER C, AKPULU C, ANDREWS R, FERREIRA A, GILLESPIE D, HENDER   T, HOOD K, MATHIAS J, MILTON R, NIETO M, TAIYARI K, CHAN GJ, BEKELE D, SOLOMON S, BASU S, CHATTOPADHYAY P, MUKHERJEE S, IREGBU K, MODIBBO F, UWAEZUOKE S. Characterisation of antimicrobial-resistant Gram-negative bacteria that cause neonatal sepsis in seven low-and middle-income countries. Nature Microbiology 2021; 6:512-523. https://doi.org/10.1038/s41564-021-00870-7?

  30. SHUPING L, MPEMBE RS, MHLANGA M, NAICKER S, TSOTETSI E, WADULA J, VELAPHI S, NAKWA F, CHIBABHAI V, MAHABEER P, MONCHO M, PRENTICE E, BAMFORD CM, REDDY K, MALULEKA C, MAWELA D, MODISE M, GOVENDER NP. Epidemiology of culture-confirmed candidemia among hospitalised children in South Africa, 2012 - 2017. Pediatric Infectious Disease Journal 2021; 20(20):18. https://doi.org/10.1097/inf.0000000000003151?

  31. SNYMAN Y, REUTER S, WHITELAW AC, STEIN L, MALOBA MRB, NEWTON-FOOT M. Characterisation of mcr-4.3 in a colistin-resistant Acinetobacternosomialis clinical isolate from Cape Town, South Africa. Journal of Global Antimicrobial Resistance 2021; 25:102-106. https://doi.org/10.1016/j.jgar.2021.03.002?

  32. SNYMAN Y, WHITELAW AC, BARNES JM, MALOBA MRB, NEWTON-FOOT M. Characterisation of mobile colistin resistance genes (mcr-3 and mcr-5) in river and storm water in regions of the Western Cape of South Africa. Antimicrobial Resistance and Infection Control 2021; 10(96):1-9. https://doi.org/10.1186/s13756-021-00963-2?

  33. SNYMAN Y, WHITELAW AC, MALOBA MRB, HESSELING AC, NEWTON-FOOT M. Carriage of colistin-resistant Gram-negative bacteria in children from communities in Cape Town (Tuberculosis child multidrug-resistant preventive therapy trial sub-study). Southern African Journal of Infectious Diseases (Formerly Southern African Journal of Epidemiology and Infection) 2021; 36(1):a241. https://doi.org/10.4102/sajid.v36i1.241?

  34. SNYMAN Y, WHITELAW AC, REUTER S, MALOBA MRB, NEWTON-FOOT M. Colistin resistance mechanisms in clinical Escherichia coli and Klebsiella spp. Isolates from the Western Cape of South Africa. Microbial Drug Resistance 2021; 27(9):1249-1258. https://doi.org/10.1089/mdr.2020.0479?

  35. TEER E, JOSEPH DE, DOMINICK LL, GLASHOFF RH, ESSOP MF. Expansion of GARP-Expressing CD4 CD25 FoxP3 T Cells and SATB1 Association with activation and coagulation in immune compromised HIV-1-infected individuals in South Africa. VIROLOGICA SINICA 2021; 36:1133-1143. https://doi.org/10.1007/s12250-021-00386-8?

  36. TEER E, JOSEPH DE, GLASHOFF RH, ESSOP MF. Monocyte/Macrophage-Mediated Innate Immunity in HIV-1 infection: from early response to late dysregulation and links to cardiovascular diseases onset. VIROLOGICA SINICA 2021; 36:565-576. https://dx.doi.org/10.1007%2Fs12250-020-00332-0?

  37. THOMSON K, DYER C, LIU F, SANDS K, PORTAL E, CARVALHO MJ, BARRELL M, BOOSTROM I, DUNACHIE S, FARZANA R, FERREIRA A, FRAYNE F, HASSAN B, JONES E, JONES L, MATHIAS J, MILTON R, REES J, CHAN GJ, BEKELE D, MAHLET A, SAHA B, IREGBU K, MODIBBO F, UWAEZUOKE S, Z. Effects of antibiotic resistance, drug target attainment, bacterial pathogenicity and virulence, and antibiotics access and affordability on outcomes in neonatal sepsis: an internal microbiology and drug evaluation prospective substudy (BARNARDS). The Lancet Digital Health 2021; 21(12):1677-1688. https://doi.org/10.1016/s1473-3099(21)00050-5? ?

  38. VAN COLLER A, GLANZMANN B, CORNELISSEN HM, MOLLER M, KINNEAR CJ, ESSER MM, GLASHOFF RH. Phenotypic and immune functional profiling of patients with suspected mendelian susceptibility to mycobacterial disease in South Africa. BMC IMMUNOLOGY 2021; 22:62. https://doi.org/10.1186/s12865-021-00452-6?

  39. VAN DER MERWE LW, DA COSTA D, REDDY K, MEYER D. Delayed-onset post-operative keratitis and endophthalmitis caused by Exophiala oligosperma. Journal of Ophthalmic Inflammation and Infection 2021; 11(46):1-5. https://doi.org/10.1186/s12348-021-00277-9?? ??

?

2020

Journal articles?

  1. ABDULGADER SMAA, VAN RIJSWIJK A, WHIT?ELAW AC, NEWTON-FOOT M. The association between pathogen factors and clinical outcomes in patients with Staphylococcus aureus bacteraemia in a tertiary hospital, Cape Town. International Journal of Infectious Diseases 2020; 91:111-118. http://doi.org/10.1016/j.ijid?.2019.11.032???

  2. ABDULGADER SMAA, WHITELAW AC, LENTSWE TI, NEWTON-FOOT M. The prevalence and molecular mechanisms of mupirocin resistance in Staphylococcus aureus isolates from a Hospital in Cape Town, South Africa. Antimicrobial Resistance and Infection Control 2020; 9(47):47, 7 pages. https://doi.org/10.1186/s13756-020-00707-8??

  3. AMENYOGBE N, DIMITRIU P, CHO P, RUCK CE, FORTUNO ES, CAI B, ALIMENTI A, C?TE HCF, MAAN EJ, SLOGROVE AL, ESSER MM, MARCHANT A, ET AL ET. Innate Immune Responses and gut microbiomes distinguish HIV-Exposed from HIV Unexposed children in a population-specific manner. JOURNAL OF IMMUNOLOGY 2020; 205:2618-2628. https://doi.org/10.4049/jimmunol.2000040??

  4. AMIRALI MH, LIEBENBERG JJ, PILLAY S, NEL JD. Sporotrichosis in renal transplant patients: two case reports and a review of the literature. Journal of Medical Case Reports 2020; 14:79, 9 pages. https://doi.org/10.1186/s13256-020-02385-x?

  5. DOWLING WB, KOEN JG. Corynebacterium jeikeium native valve infective endocarditis. European Heart Journal - Case Reports 2020; 4:1-4. https://doi.org/10.1093/ehjcr/ytaa365??

  6. DOWLING WB, OPPERMAN C. Is there value in a two-step diagnostic algorithm to confirm SARS-CoV-2 in South Africa?. SAMJ South African Medical Journal 2020; 10(7):564-565. https://doi.org/10.7196/SAMJ.2020.v110i7.14853?

  7. GLANZMANN B, MOLLER M, SCHOEMAN M, URBAN MF, VAN HELDEN PD, FRIGATI LJ, GREWAL R, PIETERS H, LOOS B, VAN HELDEN EG, GLASHOFF RH, CORNELISSEN HM, RABIE H, ESSER MM, KINNEAR CJ. Identification of a novel WAS mutation in a South African patient presenting with atypical Wiskott-Aldrich syndrome: a case report. BMC Medical Genetics 2020.  https://doi.org/10.1186/s12881-020-01054-6?

  8. KUMAR S, BOUIC PJD, ROSENKRANZ BF. In Vitro Assessment of the Interaction Potential of Ocimum basilicum (L.) Extracts on CYP2B6, 3A4, and Rifampicin Metabolism. Frontiers in Pharmacology 2020; 11(5):517. https://dx.doi.org/10.3389%2Ffphar.2020.00517?

  9. LI G, BIELICKI JA, AHMED ASMNU, ISLAM MS, BEREZIN EM, GALLACCI CB, GUINSBURG R, FIGUEIREDO CED, VIEIRA RS, SILVA R, TEIXEIRA C, TURNER P, DRAMOWSKI A, BEKKER A, WHITELAW AC, ET AL ET. Towards understanding global patterns of antimicrobial use and resistance in neonatal sepsis: insights from the NeoAMR network. ARCHIVES OF DISEASE IN CHILDHOOD 2020; 105:26-31. https://doi.org/10.1136/archdischild-2019-316816??

  10. MAPONGA TG, GLASHOFF RH, VERMEULEN H, ROBERTSON B, BURMEISTER S, BERNON MM, OMOSHORO-JONES JA, RUFF P, NEUGUT AI, JACOBSON JS, PREISER W, ANDERSSON MI. Hepatitis B virus-associated hepatocellular carcinoma in SA in the era of HIV. BMC GASTROENTEROLOGY 2020; 20(226):1-10. https://doi.org/10.1186/s12876-020-01372-2?

  11. MAZAZA A, LALLA U, TALJAARD JJ, JOHN TJ, JOHN K, SLABBERT JT, KOEGELENBERG CFN. The aetiology of severe community-acquired pneumonia requiring intensive care unit admission in the Western Cape Province, South Africa. African Journal of Thoracic and Critical Care Medicine ( Previously South African Respiratory Journal). 2020; 26(1):5-7. http://dx.doi.org/10.7196/AJTCCM.2020.v26i1.035?

  12. NAICKER S, MPEMBE RS, MAPHANGA T, ZULU TG, DESANTO D, WADULA J, MVELASE N, MALULEKA C, REDDY K, DAWOOD H, MALOBA MRB, GOVENDER NP. Decreasing fluconazole susceptibility of clinical South African Cryptococcus neoformans isolates over a decade. PLoS Neglected Tropical Diseases 2020; 14(3):e0008137, 13 pages. https://doi.org/10.1371/journal.pntd.0008137?

  13. NEL VAN ZYL K, WHITELAW AC, NEWTON-FOOT M. The effect of storage conditions on microbial communities in stool. PLoS One 2020; 15(1):e0227486, 11 pages. https://doi.org/10.1371/journal.pone.0227486???

  14. PEROVIC O, ISMAIL H, QUAN V, BAMFORD CM, NANA T, CHIBABHAI V, BHOLA P, RAMJATHAN P, SWE SWE HAN K, WADULA J, WHITELAW AC, SMITH M, MBELLE N, SINGH-MOODLEY A. Carbapenem-resistant Enterobacteriaceae in patients with bacteraemia at tertiary hospitals in South Africa, 2015 to 2018. European Journal of Clinical Microbiology and Infectious Diseases 2020; 39:1287-1294.  https://doi.org/10.1007/s10096-020-03845-4

  15. RUHANYA V, JACOBS GB, NYANDORO G, PAUL RH, JOSKA JA, SEEDAT S, GLASHOFF RH, ENGELBRECHT S. Peripheral blood lymphocyte proviral DNA predicts neurocognitive impairment in clade C HIV. Journal of Neurovirology 2020; 26(6):920-928.  https://doi.org/10.1007/s13365-020-00882-9??

  16. SNYMAN Y, WHITELAW AC, REUTER S, DRAMOWSKI A, MALOBA MRB, NEWTON-FOOT M. Clonal expansion of colistin resistant Acinetobacter baumannii isolates in Cape Town, South Africa. International Journal of Infectious Diseases 2020; 91:94-100.  https://doi.org/10.1016/j.ijid.2019.11.021?

? 

?2019

Journal articles

  1. SPRINGER PE, SLOGROVE AL, KIDD M, KALK E, BETTINGER JA, ESSER MM, COTTON MF, ZUNZA M, MOLTENO CD, KRUGER M. Neurodevelopmental and behavioural outcomes of HIV-exposed uninfected and HIV-unexposed children at 2–3 years of age in Cape Town, South Africa. AIDS CARE-PSYCHOLOGICAL AND SOCIO-MEDICAL ASPECTS OF AIDS/HIV 2020; 32(4):411-419.  https://doi.org/10.1080/09540121.2019.1637506?

  2. VAN STRATEN A, BLOKLAND RA, LOOCK JW, WHITELAW AC. Potential Ototopical Antiseptics for the treatment of active chronic otitis media: an in vitro evaluation. Otology and Neurotology 2020; 41:e1060 - e1065.? https://doi.org/10.1097/MAO.0000000000002728?

  3. LAUGHTON B, NAIDOO S, DOBBELS EFM, BOIVIN M, JANSE VAN RENSBURG A, GLASHOFF RH, VAN ZYL GU, KRUGER M, COTTON MF. Neurodevelopment at 11 months after starting antiretroviral therapy within 3 weeks of life. Southern African Journal of HIV Medicine 2019; 20(1):a1008, 8 pages. https://doi.org/10.4102/sajhivmed.v20i1.1008

  4. MURPHY RJT, RAMSAY JP, LEE YT, PANG S, O'DEA MA, PEARSON JC, AXON JE, RABY E, ABDULGADER SMAA, WHITELAW AC, COOMBS GW. Multiple introductions of methicillin-resistant Staphylococcus aureus ST612 into Western Australia associated with both human and equine reservoirs. INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS 2019; 54(6):681-685.  https://doi.org/10.1016/j.ijantimicag.2019.08.022??

  5. NEL P, PATERSON LA, HOFFMANN R. Carbapenemase-producing Enterobacteriaceae colonization in adult inpatients: A point prevalence study. Southern African Journal of Infectious Diseases 2019; 34(1):a129, 5 pages. https://doi.org/10.4102/sajid.v34i1.129?

  6. SHAFEE M, ABBAS F, TANVEER Z, WHITELAW AC, AH TOW L, ASHRAF M, AHMAD I, PATCHING SG, JABBAR A, AKBAR A, MUSTAFA M. Predominance of Central Asian strain (ST 26) in Mycobacterium tuberculosis isolates from Balochistan by spoligotyping. Journal of Infection in Developing Countries 2019; 13(7):619-625. https://doi.org/10.3855/jidc.10803?

  7. TEER E, JOSEPH DE, DRIESCHER N, NELL TA, DOMINICK LL, MIDGLEY NEK, DESHPANDE G, PAGE MJ, PRETORIUS E, WOUDBERG NJ, LECOUR S, GLASHOFF RH, ESSOP MF. HIV and cardiovascular diseases risk: exploring the interplay between T-cell activation, coagulation, monocyte subsets and lipid subclass alterations. American Journal of Physiology - Heart and Circulatory Physiology 2019; 316:1146-1157. https://doi.org/10.1152/ajpheart.00797.2018?

  8. WALTERS E, VAN DER ZALM MM, DEMERS A, WHITELAW DA, PALMER M, BOSCH C, DRAPER HR, SCHAAF HS, GOUSSARD P, LOMBARD CJ, GIE RP, HESSELING AC. Specimen Pooling as a Diagnostic Strategy for Microbiologic Confirmation in Children With Intrathoracic Tuberculosis. Pediatric Infectious Disease Journal 2019; 38(6):e128-e131. https://doi.org/10.1097/inf.0000000000002240??

Chapters in Books

  1. BOUIC PJD. Evaluation of buchu extracts in vitro: Evidence of its anti-glycaemic and anti-inflammatory properties. In: HUISAMEN B (ed.) Medicinal Effects of Agathosma (Buchu) Extracts, Aosis, Cape Town, South Africa, 2019: 17-28.  https://www.semanticscholar.org/paper/Evaluation-of-buchu-extracts-in-vitro%3A-Evidence-of-Bouic/619ea4af6964074c3b5a9dc6ebf9e858775c09f0?

 

2018

Journal articles

  1. ALLAM M, JOSEPH L, ISMAIL F, SAID H, ISMAIL N, ISMAIL A, MNYAMENI F, MTSHALI S, GOUSSARD P, PEKEUR JC, LOURENS A, OMAR SV. Whole-Genome Sequence of a Mycobacterium goodie Isolate from a Paediatric Patient in South Africa. Genome Announcements 2018; 6(3):e01478-17. https://doi.org/10.1128/genomea.01478-17?

  2. CRICHTON H, O'CONNELL N, RABIE H, WHITELAW AC, DRAMOWSKI A. Neonatal and paediatric bloodstream infections: Pathogens, antimicrobial resistance patterns and prescribing practice at Khayelitsha District Hospital, Cape Town, South Africa. South African Medical Journal 2018; 108(2):99-104. https://doi.org/10.7196/samj.2017.v108i2.12601?

  3. DRAMOWSKI A, LLOYD LG, BEKKER A, HOLGATE SL, AUCAMP MC, REDDY K, FINLAYSON H. Neonatal listeriosis during a countrywide epidemic in South Africa: A tertiary hospital's experience. South African Medical Journal 2018; 108(10):818-827.  http://dx.doi.org/10.7196%2FSAMJ.2018.v108i10.13207

  4. DZIKITI M, ESSER MM, SLOGROVE AL, BETTINGER JA, MACHEKANO R, COTTON MF. Early Breastfeeding Cessation Among HIV?Infected and HIV?Uninfected Women in Western Cape Province, South Africa. AIDS and Behavior 2018; 22:S114-S120.    https://doi.org/10.1007/s10461-018-2208-0?

  5. FLEPISI TB, BOUIC PJD, SISSOLAK G, ROSENKRANZ BF. B-cell and T-cell activation in South African HIV-1-positive non-Hodgkin's lymphoma patients. Southern African Journal of HIV Medicine 2018; 19(1):1-7. https://doi.org/10.4102/sajhivmed.v19i1.809?

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